Scomber japonicus (chub mackerel): 128370995
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Entry
128370995 CDS
T09718
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128370995
04082 Neuroactive ligand signaling
128370995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128370995
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128370995
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
128370995
NCBI-ProteinID:
XP_053187158
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Position
13:13075359..13134828
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AA seq
534 aa
AA seq
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MAVFRVRRTMCFCVWLFPLVVVVVCAQSAGVNDPSNMSLVKETVDRLLKGYDIRLRPDFG
GAPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKRAAEKIAAVNNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLDGHDSMWEPIFVDDAAIGLGEQKNKTNLTPSLWQM
EAHENILLGTLDIKNDMGVTELALGLNDPRNTMLTYDSSTLQYRKAGLARHNFGRNTLEH
HMTQKRSRLRRRTSQLKINIPDLTDVNSIDKWSRMLFPTVFSFFNIVYWLYYVN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttagagtaagaagaacgatgtgtttttgcgtctggttgttccccctcgta
gtggtcgtggtgtgcgcccaaagtgccggtgtcaatgaccctagcaatatgtctttggtt
aaagaaacggtggatagactgctgaaaggttatgatatacgattgaggccagatttcgga
ggtgccccggttggagtgggaatgaatatagacatagccagcatagacatggtatcagaa
gtcaatatggactacacattgacaatgtacttccagcaggcctggcgagacaagcgactg
tcctactctgagattcccctcaacctgaccttagataaccgggtggctgaccagctttgg
gttcccgacacctacttcctcaacgacaagaaatcgtttgtccatggtgtcacagtgaaa
aatagaatgatccgactgcacccggatggtacagtactgtacggtctaaggatcactacc
actgctgcttgtatgatggacctgagaaggtatccactggatgagcaaaactgcacacta
gagatagagagttatggttatacaacagatgacatcgagttctactggcgaggaggagac
aatgctgtaacaggcgttgacaagattgaactgccccagttctccattgtggatcataag
ctcatctccaagaatgtcgtcttctccacaggttcttaccctcgtctctccctgagtttt
aaactaaaaaggaacattgggtacttcatcctgcagacatacatgccttctatcctcatc
accattctctcctgggtctccttctggatcaactatgatgcttccgctgccagagtggct
ctaggtattaccacggtgctcaccatgactaccattaacacccacctgagagaaaccctc
cccaaaatcccatatgtaaaggccattgacatgtacctcatgggctgcttcgttttcgtc
ttcatggccctgctggagtatgcactggtaaactacatcttctttggacggggcccccag
cgtcagaaaagggcagcagagaagatagctgcagtcaacaatgaaaagatgaggatggat
ccaaacaagtggctggtggggaacgtagttggcagagatgatactctgtatgcaagaatg
aaacaaagggatctcgatggtcatgattctatgtgggaaccaatctttgtagatgatgca
gcaattggacttggcgagcaaaagaataagacaaacttgactccttccctttggcagatg
gaagcacatgaaaacatcttgttgggtaccctggacatcaagaacgacatgggagttaca
gagctggctttgggcctgaatgacccacggaataccatgctgacatacgacagctctact
ctgcagtaccgcaaagcggggctggccaggcacaactttggccggaacacgttggagcac
cacatgactcaaaagaggagccgactacggaggcgcacatcacagctaaagatcaacatc
ccagacttgactgatgtaaactctattgacaaatggtcaaggatgctcttcccaactgtt
ttttcctttttcaacattgtttactggctttactatgtcaattaa
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