Cololabis saira (Pacific saury): 133459470
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Entry
133459470 CDS
T09849
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133459470
04082 Neuroactive ligand signaling
133459470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133459470
Ion channels [BR:
csai04040
]
Ligand-gated channels
GABA-A
133459470
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
133459470
NCBI-ProteinID:
XP_061595410
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Position
14:complement(3521633..3600034)
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AA seq
525 aa
AA seq
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MVVSIARRMRTVYTCFFLVILSVFRAQSLTAHDPSNMPLVKDTVDRLLKGYDIRLRPDFG
GPPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADALW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFYWRGGDGAVTGVDRIELPQFSIVDYGLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDVYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKTALANNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLDGHDSIWEPIFMDDAGIGLGDQKNKMEPHENILLG
TLDIKNDMGVTELALGLNDPRNTMLTYDSSTLQYRKAGLARHNFGRNTLERHMTQKKSRL
RRRASQLKINIPDLTDVNSIDKWSRVMFPMVFSFFNIIYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgtcgatagcgagaagaatgaggacagtttacacctgctttttcctcgtcata
ctatctgtgttccgcgctcaaagtttgactgcccatgaccctagcaacatgcctctggtc
aaagacacagtggacagactgttaaaaggttatgatatacgactaagacctgatttcgga
ggtcctccggttcgagtggggatgaatatagacatagccagcattgacatggtatcagaa
gtcaatatggattacacattgaccatgtacttccagcaggcctggcgagacaagcggctg
tcctactctgagatccccctcaacctgaccttagataaccgggtggccgacgcgctctgg
gtgcccgacacctacttcctcaatgacaagaaatcatttgtccacggtgtcacagtaaaa
aacagaatgatccgtctgcacccagatggtaccgtgttgtatggtctgaggataactacc
acagctgcgtgcatgatggacctgagaagatacccactagatgagcaaaactgcacactg
gaaatagagagttacggttatactacagatgacatcgaattctactggcgaggtggagac
ggcgcggtgacaggagtggacaggattgagctgccgcagttttccattgtggattatggg
ctcatctccaagaacgttgtcttctccacgggttcttatcctcgtctgtccttgagtttt
aagctaaaaagaaacattgggtacttcatcctgcaaacatacatgccttctaccctcatc
accatcctctcctgggtctccttctggatcaactatgatgcctctgctgccagagtggct
ttaggtattacaacggtgctcaccatgacaaccattaacacccacttgagagaaacactt
cccaaaatcccctacgtgaaggccatagacgtttacctgatgggctgcttcgtcttcgtc
ttcctggctctgctggagtacgcgctggtgaattatatcttctttggccggggcccgcag
cgtcagaaaagggcagctgagaaaacagctttagccaacaatgaaaagatgaggatggat
ccaaacaagtggttggtgggaaatgtagttggaagagatgatactctttatgcaagaatg
aaacaacgagatttagatggccatgactcaatctgggagccgatctttatggatgatgca
ggtattggacttggcgatcaaaagaataagatggagccgcatgaaaacatcctcttgggc
accctggacatcaagaacgacatgggcgttacagagctcgctctgggtctcaatgaccca
cgaaacaccatgttaacatacgacagctctacactacagtatcgcaaagccgggctggcg
aggcacaactttgggcgaaatacactggagcgccacatgactcaaaagaagagccgacta
cggagacgggcctcgcagctaaaaatcaatatcccagatctgactgatgtaaactctatt
gacaaatggtcaagagttatgttcccaatggttttttccttcttcaacattatttactgg
ctttattatgtcaattaa
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